TY - JOUR
T1 - Accessing dynamic functional connectivity using l0-regularized sparse-smooth inverse covariance estimation from fMRI
AU - Zhang, Li
AU - Fu, Zening
AU - Zhang, Wenwen
AU - Huang, Gan
AU - Liang, Zhen
AU - Li, Linling
AU - Biswal, Bharat B.
AU - Calhoun, Vince D.
AU - Zhang, Zhiguo
N1 - Funding Information:
This work is supported in part by Shenzhen Peacock Plan (No. KQTD2016053112051497 ), in part by National Natural Science Foundation of China (No. 81871443 ), in part by the Science, Technology and Innovation Commission of Shenzhen Municipality Technology Fund (No. JCYJ20170818093322718 ). None of the authors have potential conflicts of interest to be disclosed.
Publisher Copyright:
© 2021 Elsevier B.V.
PY - 2021/7/5
Y1 - 2021/7/5
N2 - Inferring dynamic functional connectivity (dFC) from functional magnetic resonance imaging (fMRI) is crucial to understand the time-variant functional inter-relationships among brain regions. Because of the sparse property of functional connectivity networks, sparsity-promoting dFC estimation methods, which are mainly based on l1-norm regularization, are gaining popularity. However, l1-norm regularization cannot provide the maximum sparsity solution as the most natural sparsity promoting norm, the l0-norm. But l0-norm is seldom used to infer sparse dFC because an efficient algorithm to address the non-convexity problem of l0-norm is lacking. In this work, we develop a new l0-norm regularization-based inverse covariance estimation method for estimating dFC from fMRI. This novel method employs l0-norm regularizations on both spatial and temporal scales to enhance the spatial sparsity and temporal smoothness of dFC estimates. To overcome the non-convexity of l0-norm, we further propose an effective optimization algorithm based on the coordinate descent (CD). The performance of the proposed l0-norm-based sparse-smooth regularization (L0-SSR) method is examined using a series of synthetic datasets concerning various types of network topology. We further apply the proposed L0-SSR method to real fMRI data recorded in block-design motor tasks from 45 participants for the exploration of task induced dFC. Results on synthetic and real-world fMRI data show that, the L0-SSR method can achieve more accurate and interpretable dFC estimates than conventional l1-norm-based dFC estimation methods. Hence, the proposed L0-SSR method could serve as a powerful analytical tool to infer highly complex, variable, and sparse dFC patterns.
AB - Inferring dynamic functional connectivity (dFC) from functional magnetic resonance imaging (fMRI) is crucial to understand the time-variant functional inter-relationships among brain regions. Because of the sparse property of functional connectivity networks, sparsity-promoting dFC estimation methods, which are mainly based on l1-norm regularization, are gaining popularity. However, l1-norm regularization cannot provide the maximum sparsity solution as the most natural sparsity promoting norm, the l0-norm. But l0-norm is seldom used to infer sparse dFC because an efficient algorithm to address the non-convexity problem of l0-norm is lacking. In this work, we develop a new l0-norm regularization-based inverse covariance estimation method for estimating dFC from fMRI. This novel method employs l0-norm regularizations on both spatial and temporal scales to enhance the spatial sparsity and temporal smoothness of dFC estimates. To overcome the non-convexity of l0-norm, we further propose an effective optimization algorithm based on the coordinate descent (CD). The performance of the proposed l0-norm-based sparse-smooth regularization (L0-SSR) method is examined using a series of synthetic datasets concerning various types of network topology. We further apply the proposed L0-SSR method to real fMRI data recorded in block-design motor tasks from 45 participants for the exploration of task induced dFC. Results on synthetic and real-world fMRI data show that, the L0-SSR method can achieve more accurate and interpretable dFC estimates than conventional l1-norm-based dFC estimation methods. Hence, the proposed L0-SSR method could serve as a powerful analytical tool to infer highly complex, variable, and sparse dFC patterns.
KW - Dynamic functional connectivity
KW - Inverse covariance estimation
KW - Sparse network
KW - Spatial–temporal smoothness constraints
KW - l-regularization
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U2 - 10.1016/j.neucom.2021.02.081
DO - 10.1016/j.neucom.2021.02.081
M3 - Article
AN - SCOPUS:85103108600
SN - 0925-2312
VL - 443
SP - 147
EP - 161
JO - Neurocomputing
JF - Neurocomputing
ER -