AlignS: A processing-in-memory accelerator for DNA short read alignment leveraging SOT-MRAM

Keyphrases

• In-memory 100%
• Short Read Alignment 100%
• SOT-MRAM 100%
• Alignment Algorithm 40%
• Big Data Analytics 20%
• Computational Memory 20%
• Computing Architecture 20%
• High-throughput 20%
• Hardware Efficiency 20%
• DNA Sequencing 20%
• Highly Parallel 20%
• Parallel Processing 20%
• Parallelization 20%
• Processing Unit 20%
• Resistive Random Access Memory (ReRAM) 20%
• Mapping Method 20%
• Computationally Expensive 20%
• Data Partitioning 20%
• Index-based 20%
• Local Storage 20%
• Next-generation Sequencing Platforms 20%
• Local Processing 20%
• Correlated Data 20%
• Partitioning Methodology 20%
• Von Neumann 20%
• Algorithmic Level 20%
• Data Mapping 20%
• FM-index 20%
• Energy-efficient Signal Processing 20%
• Co-simulation 20%
• Read Alignment 20%

Computer Science

• In-Memory Processing 100%
• Energy Efficient 50%
• Computer Architecture 50%
• High Throughput 50%
• Processing Unit 50%
• Big Data Analytics 50%
• Intensive Task 50%
• Parallel Processing 50%
• Massive Amount 50%
• Level Parallelism 50%
• Application Specific Integrated Circuit 50%
• Data Partitioning 50%
• Accelerator Memory 50%
• Correlated Data 50%
• Data Analytics Problem 50%
• Memory Operation 50%