@inproceedings{ae0d310aa7a24ffb83dcda61a4a0db5e,
title = "CBEx: A Hybrid Approach for Cancer Biomarker Extraction",
abstract = "This paper presents a novel hybrid approach for extracting cancer biomarkers from pathology reports and a prototype system, CBEx (Cancer Biomarker Extractor). It integrates a Long Short-Time Memory Neural Network that identifies biomarker-containing sentences and a dictionary-based method to extract biomarker mentions from those sentences. Preliminary results show that CBEx outperforms existing methods.",
keywords = "Cancer Biomarkers, Information Extraction, Natural Language Processing, Neural Networks",
author = "Xiangyu Gao and Jinhe Shi and Wenjin Chen and Nancy Sazo and Huiqi Chu and Evita Sadimin and Foran, {David J.} and Yi Chen",
note = "Publisher Copyright: {\textcopyright} 2020 IEEE.; 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020 ; Conference date: 16-12-2020 Through 19-12-2020",
year = "2020",
month = dec,
day = "16",
doi = "10.1109/BIBM49941.2020.9313403",
language = "English (US)",
series = "Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020",
publisher = "Institute of Electrical and Electronics Engineers Inc.",
pages = "2958",
editor = "Taesung Park and Young-Rae Cho and Hu, {Xiaohua Tony} and Illhoi Yoo and Woo, {Hyun Goo} and Jianxin Wang and Julio Facelli and Seungyoon Nam and Mingon Kang",
booktitle = "Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020",
address = "United States",
}