TY - JOUR
T1 - Decks of rooted binary trees
AU - Clifton, Ann
AU - Czabarka, Éva
AU - Dossou-Olory, Audace A.V.
AU - Liu, Kevin
AU - Loeb, Sarah
AU - Okur, Utku
AU - Székely, László
AU - Wicke, Kristina
N1 - Publisher Copyright:
© 2024 Elsevier Ltd
PY - 2025/2
Y1 - 2025/2
N2 - We consider extremal problems related to decks and multidecks of rooted binary trees (a.k.a. rooted phylogenetic tree shapes). Here, the deck (resp. multideck) of a tree T refers to the set (resp. multiset) of leaf-induced binary subtrees of T. On the one hand, we consider the reconstruction of trees from their (multi)decks. We give lower and upper bounds on the minimum (multi)deck size required to uniquely encode a rooted binary tree on n leaves. On the other hand, we consider problems related to deck cardinalities. In particular, we characterize trees with minimum-size as well as maximum-size decks. Finally, we present some exhaustive computations for k-universal trees, i.e., rooted binary trees that contain all k-leaf rooted binary trees as leaf-induced subtrees.
AB - We consider extremal problems related to decks and multidecks of rooted binary trees (a.k.a. rooted phylogenetic tree shapes). Here, the deck (resp. multideck) of a tree T refers to the set (resp. multiset) of leaf-induced binary subtrees of T. On the one hand, we consider the reconstruction of trees from their (multi)decks. We give lower and upper bounds on the minimum (multi)deck size required to uniquely encode a rooted binary tree on n leaves. On the other hand, we consider problems related to deck cardinalities. In particular, we characterize trees with minimum-size as well as maximum-size decks. Finally, we present some exhaustive computations for k-universal trees, i.e., rooted binary trees that contain all k-leaf rooted binary trees as leaf-induced subtrees.
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U2 - 10.1016/j.ejc.2024.104076
DO - 10.1016/j.ejc.2024.104076
M3 - Article
AN - SCOPUS:85204464705
SN - 0195-6698
VL - 124
JO - European Journal of Combinatorics
JF - European Journal of Combinatorics
M1 - 104076
ER -