Enhancing Adaptive Physics Refinement Simulations Through the Addition of Realistic Red Blood Cell Counts

  • Sayan Roychowdhury
  • , Samreen T. Mahmud
  • , Aristotle Martin
  • , Peter Balogh
  • , Daniel F. Puleri
  • , John Gounley
  • , Erik W. Draeger
  • , Amanda Randles

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Abstract

Simulations of cancer cell transport require accurately modeling mm-scale and longer trajectories through a circulatory system containing trillions of deformable red blood cells, whose intercellular interactions require submicron fidelity. Using a hybrid CPU-GPU approach, we extend the advanced physics refinement (APR) method to couple a finely-resolved region of explicitly-modeled red blood cells to a coarsely-resolved bulk fluid domain. We further develop algorithms that: capture the dynamics at the interface of differing viscosities, maintain hematocrit within the cell-filled volume, and move the finely-resolved region and encapsulated cells while tracking an individual cancer cell. Comparison to a fully-resolved fluid-structure interaction model is presented for verification. Finally, we use the advanced APR method to simulate cancer cell transport over a mm-scale distance while maintaining a local region of RBCs, using a fraction of the computational power required to run a fully-resolved model.

Original languageEnglish (US)
Title of host publicationSC 2023 - International Conference for High Performance Computing, Networking, Storage and Analysis
PublisherIEEE Computer Society
ISBN (Electronic)9798400701092
DOIs
StatePublished - 2023
Externally publishedYes
Event2023 International Conference for High Performance Computing, Networking, Storage and Analysis, SC 2023 - Denver, United States
Duration: Nov 12 2023Nov 17 2023

Publication series

NameInternational Conference for High Performance Computing, Networking, Storage and Analysis, SC
ISSN (Print)2167-4329
ISSN (Electronic)2167-4337

Conference

Conference2023 International Conference for High Performance Computing, Networking, Storage and Analysis, SC 2023
Country/TerritoryUnited States
CityDenver
Period11/12/2311/17/23

All Science Journal Classification (ASJC) codes

  • Computer Networks and Communications
  • Computer Science Applications
  • Hardware and Architecture
  • Software

Keywords

  • cancer cells
  • computational fluid dynamics
  • heterogeneous architecture
  • multiphysics
  • multiscale modeling
  • red blood cells

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