GTfold: A scalable multicore code for RNA secondary structure prediction

Keyphrases

• Prediction Accuracy 100%
• Multicore 100%
• RNA Secondary Structure Prediction 100%
• Multicore chips 100%
• Freely Available 50%
• Order of Magnitude 50%
• Concurrency 50%
• RNA Sequencing (RNA-seq) 50%
• Parallelization 50%
• Shared Memory 50%
• Symmetric multiprocessor 50%
• Computational Requirements 50%
• Secondary Structure 50%
• Thermodynamic Model 50%
• De-facto 50%
• Exact Algorithm 50%
• Improved Algorithm 50%
• New Paths 50%
• Comparable Accuracy 50%
• Large RNAs 50%
• Accurate Calculation 50%
• Computational Molecular Biology 50%
• Multi-core Parallel 50%
• Multi-processor System-on-chip (MPSoC) 50%
• Internal Loop 50%
• Algorithmic Applications 50%

Computer Science

• Multicore 100%
• Secondary Structure 100%
• Parallelism 50%
• Approximation (Algorithm) 25%
• Open Source 25%
• Paradigm Shift 25%
• De Facto Standard 25%
• Concurrency 25%
• Symmetric Multi-Processor 25%
• Prediction Accuracy 25%
• Exact Algorithm 25%
• Shared Memory 25%