TY - JOUR
T1 - Guidelines for the reuse of ontology content
AU - Halper, Michael
AU - Soldatova, Larisa N.
AU - Brochhausen, Mathias
AU - Sabiu Maikore, Fatima
AU - Ochs, Christopher
AU - Perl, Yehoshua
N1 - Funding Information:
Research reported in this publication by author MB was partially supported by the National Institute of General Medical Sciences of the National Institutes of Health under award number R01GM111324. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.
Publisher Copyright:
© 2023-IOS Press. All rights reserved.
PY - 2023
Y1 - 2023
N2 - Reuse of elements from existing ontologies in the construction of new ontologies is a foundational principle in ontological design. It offers the benefits, among others, of consistency and interoperability between such knowledge structures as well as sharing resources. Reuse is widely found within important collections of established ontologies, such as BioPortal and the OBO Foundry. However, reuse comes with its own potential problems involving ontological commitment, granularity, and ambiguity. Guidelines are proposed to aid ontology developers and curators in their prospective reuse of content. These guidelines have been gleaned over years of practice in the ontology field. The guidelines are couched in experiential reports on designing and curating particular ontologies (e.g., EXACT and EXACT2) and using generally accepted approaches (e.g., MIREOT) in doing so. Various software tools to assist in ontology reuse are surveyed and discussed.
AB - Reuse of elements from existing ontologies in the construction of new ontologies is a foundational principle in ontological design. It offers the benefits, among others, of consistency and interoperability between such knowledge structures as well as sharing resources. Reuse is widely found within important collections of established ontologies, such as BioPortal and the OBO Foundry. However, reuse comes with its own potential problems involving ontological commitment, granularity, and ambiguity. Guidelines are proposed to aid ontology developers and curators in their prospective reuse of content. These guidelines have been gleaned over years of practice in the ontology field. The guidelines are couched in experiential reports on designing and curating particular ontologies (e.g., EXACT and EXACT2) and using generally accepted approaches (e.g., MIREOT) in doing so. Various software tools to assist in ontology reuse are surveyed and discussed.
KW - ontological commitment
KW - ontology modeling
KW - Ontology reuse
KW - ontology reuse guidelines
KW - ontology reuse tools
UR - http://www.scopus.com/inward/record.url?scp=85161265044&partnerID=8YFLogxK
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U2 - 10.3233/AO-230275
DO - 10.3233/AO-230275
M3 - Article
AN - SCOPUS:85161265044
SN - 1570-5838
VL - 18
SP - 5
EP - 29
JO - Applied Ontology
JF - Applied Ontology
IS - 1
ER -